Commit Graph
6 Commits
Author SHA1 Message Date
jakman85andClaude Opus 5 cf7d97e546 fix(obs): twelve app SLI rules read a signal that exists; kill the dead ServiceMonitors
Twelve `<app>-down` SLI rules were STRUCTURALLY INERT. Each read `up{job="<app>"} == 0`,
and the ServiceMonitor rendered beside it named `endpoints[].port: metrics` — a port NO
rendered app Service defined. Every monitor discovered ZERO targets, so no `up{job="<app>"}`
series existed and the rule could not fire. Verified on prod before this change:
`count by (job) (up)` listed 24 jobs and not one of the twelve appeared; `up{job="plex"}`
and `up{job="gitea"}` both returned nothing. `PrometheusTargetsMissing` could not see it
either — a target that was never discovered has no `up` series to be 0.

THE PORT NAME WAS NEVER THE MISSING PIECE. Ground truth per app: Plex, Pi-hole, Jackett,
qBittorrent, Sonarr, Radarr, Seerr, Semaphore and Nextcloud export NO Prometheus metrics
without a separate exporter sidecar; Gitea can but only with app.ini metrics enabled;
Keycloak does, on the operator's management port, already scraped by
platform/keycloak/servicemonitor.yaml; vm-demo is a KubeVirt VM with no Service at all, so
its monitor selected nothing whatsoever. `metrics: true` was asserting a fact none of them
had. There was also a THIRD layer of inertness nobody had hit yet: every app namespace ships
default-deny with `ingress: []` and the renderer emitted no monitoring allow, so even a
correct port would have been dropped by policy — while renderer-contract.md claimed the
baseline carried such an allow.

FIXED IN THE GENERATOR, not in twelve rendered files:
  * `slis: [up]` now renders a `<app>-down` alert against kube-state-metrics readiness of the
    service's own workload object —
    `kube_deployment_status_replicas_available{namespace,deployment} == 0 or absent(...)`,
    `kube_statefulset_status_replicas_ready` for a StatefulSet, and
    `absent(kubevirt_vmi_info{namespace,name,phase="running"})` for a VM. The same idiom
    KeycloakDown has used since it was fixed. kube-state-metrics IS scraped, so this needs no
    exporter and no new target. The `or absent(...)` half is load-bearing: the signal
    DISAPPEARING now fires the alert instead of silencing it.
  * schema 1.6.0 adds `observability.metricsEndpoint` — WHERE metrics are served. A
    ServiceMonitor is rendered ONLY from it, and it renders all three halves of a working
    scrape together: the named Service port, the monitor endpoint, and the
    monitoring-namespace CiliumNetworkPolicy allow. No catalog entry declares one, so twelve
    dead ServiceMonitors are gone. `metrics: true` keeps meaning logs-to-Loki plus
    kube-state-metrics liveness.
  * schema 1.6.0 also adds `observability.livenessWorkload`, and catalog/keycloak.yaml uses
    it. Keycloak's server is a StatefulSet run by the operator; the default Deployment shape
    would have made its `absent()` half fire FOREVER — the other failure mode this repo has
    shipped.
  * renderer selftest gains cases 9/9a/9b/9c: no metricsEndpoint => no monitor; the up SLI
    must not read `up{job=...}`; endpoint port must exist on the Service; the metrics port
    must NOT reach the Gateway allow; an unknown livenessWorkload.kind is REFUSED.

PROOF, both directions, for all twelve (apps/wave-{0,1,2}/tests/app-slis.test.yaml, run by
platform/monitoring/tests/run.sh over the RENDERED manifests):
  * quiet on the healthy state; firing on no-ready-replica; firing when the series is ABSENT;
    the VM asserted both gone and in a non-running phase; per-app isolation asserted, and
    keycloak asserted un-maskable by its neighbours (keycloak-operator Deployment,
    keycloak-db StatefulSet ready in the same namespace).
  * mutation-checked: six mutations, each turning its suite red — reverting plex to
    `up{job=...} == 0`; dropping seerr's `absent()` half; pointing keycloak at a Deployment;
    capitalising the VMI phase to `Running`; widening keycloak's matcher to the namespace;
    inverting plex's `== 0` to `!= 0`. Control run green.
  * live on prod with `promtool query instant`: all ten deployed app Deployments export
    `kube_deployment_status_replicas_available`,
    `kube_statefulset_status_replicas_ready{namespace="keycloak",statefulset="keycloak"}` = 2,
    `kubevirt_vmi_info` present with a lowercase `phase="running"`; and evaluating the twelve
    SHIPPED expressions returns no series for eleven (quiet, not permanently firing). The
    twelfth is vm-demo, which is not in apps/wave-0/kustomization.yaml and so is not deployed
    — its rule is not applied either.

DELETION WAS NOT THE ANSWER, and the evidence is recorded rather than assumed:
kube-prometheus-stack's `kubernetes-apps` group IS live on prod (17 rules, KubePodNotReady /
KubeDeploymentReplicasMismatch among them), so app pods are not unmonitored — but that is a
generic warning keyed to a namespace, not the per-service CRITICAL SLI R-OBS-01 declares.
platform/monitoring/alerts.yaml carries no generic app-readiness rule at all.

GUARD SO IT CANNOT RECUR SILENTLY: new whole-repo L0 invariant
conformance/tests/l0-static/servicemonitor-ports-resolve. It walks the MONITORS, not the
alerts, so it needs no `up{job=...}` rule to reach one, and resolves each endpoint by SELECTOR
across the whole tree rather than by same-file adjacency. Fixing the alerts DELETED the only
thing that made the broken monitors visible to the sibling check, which is exactly why this
axis needed its own home. It declares `conformance.home.k3s/scope: whole-repo` and adds no
ci/l0.sh stage. Proven to FAIL on the pre-fix tree: 15 failures — eleven port disagreements,
vm-demo's monitor matching no Service at all, and the three generator/contract assertions —
and to pass after. Its resolver is additionally proven on in-check fixtures (agreeing pair
accepted, disagreeing pair rejected, target-less endpoint rejected), because after the fix
there are zero in-repo monitors left for it to judge and a guard whose only evidence is
"nothing failed" cannot be told apart from one that stopped working. It also asserts
r_servicemonitor does not HARDCODE a port name — the mechanism by which one edit gave twelve
services the same wrong one.

Also fixed, found on the way:
  * platform/monitoring/tests/run.sh discovered the SUITE convention only inside
    platform/monitoring/tests/ while documenting it as general — a suite added anywhere else
    was never run and still looked like coverage. Now discovered tree-wide; a misplaced
    *.test.yaml fails loudly instead of vanishing.
  * KNOWN_UNWIRED_JOBS in alert-metrics-have-scrape-targets is now EMPTY, and the twelve
    apps/* entries in alert-rules-unit-tested's UNTESTED_FILES are gone — both because the
    gaps were CLOSED, not waived. Both registers are shrink-only and a stale entry fails.
  * renderer-contract.md claimed the default-deny baseline carried a standing monitoring
    scrape allow. It never did; the claim is corrected and the allow is now real, per declared
    metrics endpoint and scoped to that one port.

Co-Authored-By: Claude Opus 5 <[email protected]>
2026-09-13 17:11:30 -05:00
jakman85andClaude Opus 5 82aff4d053 feat(apps): attach the media library and the legacy Nextcloud dataset over NFS
plex, sonarr, radarr and nextcloud each gain one bulk volume. Authored in the catalog and
re-rendered, never hand-edited into apps/ (render-golden: 10/10). Layout, the export change the
operator must apply, the uid analysis and the validation probes are in docs/BULK-NFS-STORAGE.md;
everything there was measured on the host over read-only SSH, not assumed.

WHAT THE LAYOUT TURNED OUT TO BE, AND WHY IT DECIDED THE DESIGN
/mnt/Storage/plex holds movies/ tv/ photos/ AND downloads/ as SIBLINGS in one dataset — so the
arrs' import source and their libraries are one filesystem on the server, and the download client's
completed folders are already named radarr/ and tv-sonarr/. The k3s arrs are joining a tree an arr
stack has been driving for a long time.

That sibling fact is the whole argument for the arrs mounting the export ROOT rather than a
subPath per directory. Sonarr and Radarr import by hardlinking or atomically renaming, both
same-filesystem operations, and to the kernel "same filesystem" means SAME MOUNT. Two subPath
mounts of one export are two mounts: link() across them returns EXDEV regardless of what the
server knows, and the arrs do not fail loudly — they degrade to copy-then-delete, rewriting every
file over NFS and destroying the seeding copy. The smallest subtree containing both tv/ and
downloads/ IS the export root, so the root mount is the MINIMAL mount that preserves hardlinks.
Least privilege bounded below by a hard requirement. The cost is stated, not hidden: sonarr can
also write /media/movies.

  plex       /mnt/Storage/plex      -> /media                 ro   ReadOnlyMany
  sonarr     /mnt/Storage/plex      -> /media                 rw   ReadWriteMany
  radarr     /mnt/Storage/plex      -> /media                 rw   ReadWriteMany
  nextcloud  /mnt/Storage/nextcloud -> /mnt/legacy-nextcloud  ro   ReadOnlyMany  (subPath: nextcloud)

Plex is read-only because it indexes and streams; every write on that tree belongs to the arrs, and
saying so removes Plex from the set of things that can damage 8.33 T. All three media consumers use
the SAME mountPath deliberately: when qbittorrent is eventually given this export, the arrs and the
download client will already agree on absolute paths, which is the other precondition for hardlinked
imports.

*** /media AND NOT /data — A COLLISION CAUGHT WHILE RENDERING. *** The arrs' Longhorn config PVC
renders at the renderer default /data/config. A media mount at /data is mounted OVER it and MASKS
the config volume: the pod comes up with its app database shadowed by an 8 T media tree. That
discovery also exposed a SEPARATE PRE-EXISTING BUG, reported and deliberately NOT fixed here:
LinuxServer arr images run with -data=/config, so /data/config is very likely the wrong home for
that PVC and the app has been writing its EPHEMERAL layer — the exact failure catalog/plex.yaml's
mountPath comment records already having been bitten by. Plex was fixed; sonarr, radarr, qbittorrent
and jackett were not. Fixing it starts those apps from an empty config volume, so it needs its own
change with the operator present. This change does not make it worse.

UID/GID — THE FAILURE THIS TIER ALWAYS HAS
The export is sec=sys + no_root_squash, so the client's numeric uid passes through verbatim and the
server's ownership is the entire access story. The tree is 0755 owned 1000:3000, so ONLY uid 1000
can write it. LinuxServer images default to 911. Without intervention sonarr and radarr would have
mounted cleanly, gone Ready, and failed EVERY import with EACCES.

And fsGroup cannot fix that — the in-tree NFS plugin does NO ownership management, so
podSecurityContext.fsGroup is a no-op on an NFS volume. Reaching for it is how this gets
misdiagnosed. So PUID=1000/PGID=3000 are added to both arrs (PGID 3000 keeps what they write
group-readable to the live non-k3s consumers of the same export), and fsGroup: 3000 is added for
the LONGHORN config PVC only, so changing PUID does not depend on the image re-chowning /config.
plex already runs as 1000 and reads a 0755 tree; nextcloud reads as www-data. Neither needs work.

NEXTCLOUD IS MOUNTED READ-ONLY, WHICH IS A DEVIATION FROM THE BRIEF — ON EVIDENCE
The task said nextcloud writes. The dataset says otherwise: of 270 G, 267 G is config_backup/, the
rest is config/ (103 M) and config_old/ (3.4 G). There is NO data/ directory. This is the OLD
non-k3s instance's configuration plus a backup blob — an archive — and that instance is STILL LIVE
on it (exported rw to 192.168.1.6 and .5, which the operator has said must stay active). Two
Nextclouds writing one instance's config directory, each with its own database and therefore its own
oc_filecache, is unrecoverable corruption. "Do not grant more than needed" lands on ro, and ro is
the trivially reversible choice. If the intent is in fact a MIGRATION, that is a larger and more
deliberate change than a mount; the one-line flip is documented.

Read-only for nextcloud can additionally be enforced SERVER-side (only nextcloud consumes that
dataset from k3s), and the sharenfs value in the doc uses ro= for the k3s clients. The media tree
cannot: plex and the arrs may land on any node, so the server sees the same addresses for reader
and writers. Plex's ro is therefore a client-side guarantee — stated as a limitation, not left
implied.

Co-Authored-By: Claude Opus 5 <[email protected]>
2026-09-07 23:54:13 -05:00
jakman85andClaude Opus 5 c8c1d2935d feat(dns): per-environment BASE_DOMAIN — prod moves to its own subdomain
gate / gate (push) Has been cancelled
gate / conformance (push) Has been cancelled
INCIDENT FIX. Prod's external-dns DELETED EVERY ONE OF DEV'S PUBLIC DNS RECORDS. Both
clusters ran policy: sync against the SAME Cloudflare zone with the SAME implicit
txtOwnerId (`default`), so prod believed it owned dev's records, found no matching sources,
and removed them plus their TXT registry entries. Dev recovered ~30s after prod was scaled
to 0; verified restored against Cloudflare directly (my first check went through a pfSense
override and falsely showed healthy — local resolvers are not evidence about public DNS).

THE MISS WAS MINE, and it was a failure of imagination in how I briefed every agent. I put
"never touch dev" in brief after brief and enforced it — separate kubeconfigs, verified
--limit, sha-checked dev's kubeconfig before and after. Every one of those guards held. NONE
of them covered SHARED EXTERNAL RESOURCES. Prod reconciling its OWN correctly-authored
manifests reached across a third party and destroyed dev's state. Cluster-to-cluster
isolation was verified; the dependency that mattered was cluster-to-Cloudflare.

Operator's architecture: dev -> *.dev.home.keithjackson.dev, prod ->
*.prod.home.keithjackson.dev, apex CNAME <svc>.home -> <svc>.prod.home.

PHASE 1 ONLY (this commit): prod moves to its own subdomain. DEV IS NOT MIGRATED and its
effective hostname stays home.keithjackson.dev, so dev renders byte-identically and nothing
live moves. That alone ends the collision and unblocks prod. Phase 2 (dev -> dev.home. +
apex CNAMEs) is deferred to when the operator is present: it relocates Keycloak's issuer and
12 clients' redirect URIs, forces a rolling k3s restart and kubectl SSO re-issue for every
user, and moves gitea.home. — which is BOTH the GitOps source and the current push target.

BASE_DOMAIN WAS A DEAD KNOB — it existed in cluster-vars but the status report flagged it as
referenced by nothing, because hostnames were hardcoded throughout. Now real: 141 refs.
Searched the AUTHORITATIVE reconciled set by resolving each Flux spec.path transitively via
conformance/lib/status.py — the same resolver the L0 gate uses, so "what Flux reconciles"
has one definition. 185 occurrences across 47 files in 154 reconciled files. Tokenized:
Gateway listeners, the wildcard Certificate, coredns-custom, external-dns, Keycloak
instance/realm (26 redirect URIs), oauth2-proxy, Grafana OIDC, all HTTPRoutes, Homepage's 15
links, 30 runbook_urls, unifi cloud-init, render.py's ZONE constant (which drove
--oidc-issuer-url/--cookie-domain/--whitelist-domain on every forward-auth sidecar) and 11
catalog/ ServiceDefinitions re-rendered canonically. Left alone: 43 comment/prose
occurrences and non-reconciled paths.

TWO THAT CANNOT BE TOKENIZED, flagged not forced:
  - headlamp's OIDC URLs live inside a SOPS-encrypted Secret; re-encrypting rewrites the MAC
    over every value and the OFFLINE harness cannot verify it (kustomize does not decrypt),
    so an error would break live-dev SSO with no pre-flight proof. Prod needs its own copy
    anyway — client secrets are realm-scoped.
  - kube-apiserver --oidc-issuer-url is a k3s SERVER FLAG, not a manifest, so Flux can never
    reach it. Done on the inventory seam instead (k3s_base_domain -> k3s_oidc_issuer_url,
    overridden in group_vars/k3s_prod). Verified per host: dev keeps the default, prod gets
    prod.home.

EXTERNAL-DNS OWNER, the actual incident cause: txtOwnerId is now explicit per environment —
dev renders exactly `default` (the chart default it was already using, so its existing
records stay recognised) and prod gets `prod`. The BASE default is a NON-COLLIDING SENTINEL,
deliberately not `default`, so a future environment that forgets the knob owns nothing and
can delete nothing rather than silently inheriting dev's identity.

I OVERRODE ONE AGENT DECISION against our own prior finding: it narrowed prod's
domainFilters to prod.home.keithjackson.dev as defence in depth. FINDING F-DNS1
(DECISIONS-LOG 2026-08-17) already proved a subdomain filter DROPS THE PARENT ZONE —
ExternalDNS generates the record then skips it with "no hosted zone matching record DNS
Name". Prod would have published NOTHING. Set to the ZONE (keithjackson.dev) like dev.
Isolation comes from the subdomain split plus txtOwnerId, which is what the incident
actually needed and what a domain filter cannot provide.

DEV PROVEN UNCHANGED: 11 of 12 substituting paths byte-identical; the 12th differs by
exactly one line, `+ txtOwnerId: default` — the value dev was already using implicitly.
POSITIVE CONTROLS confirm the harness is not blind: perturbing BASE_DOMAIN moves 10 of 12
hashes (the 2 that don't provably contain no hostname), perturbing the owner id moves
exactly 1. Prod's rendered output has ZERO home.keithjackson.dev references outside prod.,
and its cert renders *.prod.home.keithjackson.dev — no overlap with dev's.

L0 substitution assertions 106 -> 254; BASE_DOMAIN is no longer flagged dead. Gate PASS.

PROD REMAINS SUSPENDED (platform + 10 downstream tiers) pending review; nothing applied.

Serves: R-ENV-02, R-DNS-01, R-DNS-02, R-DNS-03, R-TLS-01.

Co-Authored-By: Claude Opus 5 (1M context) <[email protected]>
2026-09-04 22:43:54 -05:00
jakman85andClaude Opus 4.8 cde2cd138f plex: add env vars (PLEX_UID/GID, TZ, ALLOWED_NETWORKS); homepage: rename Overseerr->Seerr
Plex Deployment had no Plex env vars. Add via the ServiceDefinition env list
(rendered verbatim by catalog/render.py):
- PLEX_UID/PLEX_GID=1000 (image chowns /config to this and drops; matches the
  Longhorn ownership convention seerr/semaphore use)
- TZ=Etc/UTC (no other service sets TZ repo-wide)
- ALLOWED_NETWORKS=10.0.0.0/8,192.168.0.0/16 so in-cluster clients (Seerr ->
  plex:32400) are trusted as LAN (pod CIDR 10.0.0.0/16 + svc 10.43.0.0/16 + LAN)

PLEX_CLAIM intentionally not set (4-min TTL is unusable via git; one-time live
claim persists on /config). ADVERTISE_IP deferred: the only candidate host
resolves via split-horizon DNS to the internal Gateway VIP and its remote
reachability is unverified — a wrong value breaks remote access, so omitted
per prefer-safety, documented as a follow-up in catalog/plex.yaml.

Homepage still labeled seerr as "Overseerr"; renamed the tile to "Seerr"
(icon mdi-play-box-multiple keeps — not overseerr-specific).

Co-Authored-By: Claude Opus 4.8 <[email protected]>
2026-08-28 13:20:34 -05:00
jakman85andClaude Opus 4.8 d835a27875 fix(plex): mount config PVC at /config (image's real config dir)
The plexinc/pms-docker image writes its identity/claim token and the
Library metadata DB under /config, but the config PVC was mounted at the
renderer default /data/config. Plex therefore wrote all state to the
container's EPHEMERAL layer: the server stayed UNCLAIMED (servers.plex.tv
returns 401 with an empty X-Plex-Token) and lost everything on restart,
which is why seerr's "add Plex" failed even with SSL off.

Set the config volume mountPath to /config in catalog/plex.yaml and
re-render apps/wave-0/plex.yaml (only the mountPath line changes; all
other services byte-identical). No fsGroup/securityContext needed:
verified in-cluster the image inits as root (s6-svscan PID 1), chowns
/config to the plex user, then drops privileges (the "Plex Media Server"
process runs as plex) — root can chown the mounted PVC regardless of
fsGroup.

PLEX_CLAIM auto-claim is intentionally NOT wired: the env secretKeyRef
schema has no `optional`, so a placeholder/absent claim Secret would
crashloop the pod. The claim is an operator step (UI sign-in after the
roll, or add a PLEX_CLAIM env from a fresh https://plex.tv/claim token).

Co-Authored-By: Claude Opus 4.8 <[email protected]>
2026-08-27 18:53:46 -05:00
jakman85andClaude Opus 4.8 36a1a4e1f9 refactor(apps): split monolithic apps Kustomization into dependency waves
Replaces the single `apps` Flux Kustomization with dependency-ordered waves
(apps-wave-0..2) so a crashlooping workload isolates to its wave + downstream
instead of stalling the entire app tier. Parallel within a wave, ordered across.

- catalog/render.py: compute waves by longest dependency-path depth over the
  ServiceDefinition `dependencies:` edges (a `<svc>-db` is a leaf, so its
  consumer lands strictly higher — the "DB below consumer" rule falls out of
  longest-path, no special case). `--emit-waves` generates the per-wave
  kustomizations + Flux CRs; `--wave-layout` places renders into the right dir.
  wave 0: pihole gitea jackett plex qbittorrent nextcloud-db semaphore-db
  wave 1: sonarr radarr nextcloud semaphore gitea-actions
  wave 2: seerr
- apps/*.yaml -> apps/wave-{0,1,2}/ (byte-identical moves; SOPS files intact).
- clusters/base: apps.yaml removed; apps-wave-{0,1,2}.yaml added (dependsOn
  chain: platform-config -> wave-0 -> wave-1 -> wave-2, prune+wait each).
- clusters/dev: one SOPS decryption patch per wave (load-bearing).
- DESIGN-waves.md: wave table, topology, cutover runbook.

Cutover: preceded by disabling prune on `apps` (1bfb0db) so removing that
object here does not GC its resources; the wave Kustomizations SSA-adopt the
byte-identical manifests in place (no restart, no PVC churn).

Co-Authored-By: Claude Opus 4.8 <[email protected]>
2026-08-26 12:19:00 -05:00