Files
home-network-k3s-impl/clusters
jakman85andClaude Opus 5 0a0527e7db feat(backup): prod's off-cluster DR lands on R2 — and stops the WAL clock
Prod has been archiving WAL to `TBD-PROD-S3-BACKUP-ENDPOINT` since bootstrap.
Verified live 2026-09-07 on all three CNPG Clusters: ContinuousArchiving=False,
"unexpected failure invoking barman-cloud-wal-archive: exit status 4". Because
archive_mode is ON, that is not a degraded backup — it is a DISK-FULL CLOCK.
Postgres will not recycle a segment it has not archived, so keycloak-db's pgdata
PVC is at 579 MiB used / 4360 MiB free and climbing monotonically. When it fills,
the primary PANICs and takes SSO down, and with it kubectl OIDC, Grafana,
Headlamp, Gitea and forward-auth. Wiring the endpoint is what lets Postgres drain
the whole accumulated backlog in one pass.

THE KNOB LAYOUT (three new, one repurposed) and why it is shaped this way.

The operator created exactly ONE R2 bucket, `k3s-prod-backup`, but the two backup
tools want differently-SHAPED values: the Velero chart takes `bucket` and `prefix`
as separate fields, while CNPG's barmanObjectStore.destinationPath is one full
s3:// URL whose first path segment IS the bucket. So:

  S3_BACKUP_ENDPOINT     dev http://192.168.1.9:9000   prod https://<acct>.r2...
  S3_BACKUP_REGION       dev us-east-1                 prod auto
  VELERO_BACKUP_BUCKET   dev velero                    prod k3s-prod-backup
  VELERO_BACKUP_PREFIX   dev ""                        prod velero
  CNPG_BACKUP_PATH       dev s3://cnpg                 prod s3://k3s-prod-backup/barman

There is deliberately NO separate `S3_BACKUP_BUCKET`: CNPG's bucket already lives
inside CNPG_BACKUP_PATH, and a second knob holding the same bucket name twice is a
rotation waiting to drift. Three knobs, each shaped for its own consumer, and no
two of them can contradict each other.

TENANCY. Inside k3s-prod-backup, velero and barman get disjoint TOP-LEVEL
prefixes — s3://k3s-prod-backup/velero/ and s3://k3s-prod-backup/barman/<cluster>/
— with the bucket ROOT left empty so a misrendered prefix lands somewhere
obviously wrong instead of silently colliding. This is not tidiness: Velero ADOPTS
every backup under its location and TTL-DELETES it on retention, so an overlapping
prefix would let it reap WAL segments; and interleaving two Postgres servers' WAL
into one prefix corrupts the chain outright. Dev↔prod isolation is doubly
independent — different endpoint AND different bucket names — so neither cluster
can reach the other's objects even with a mis-substituted prefix.

DEV IS UNCHANGED, BYTE-FOR-BYTE, and that is asserted rather than assumed. Base
defaults are dev's LIVE values (verified against the running cluster: BSL
bucket=velero with NO prefix, region us-east-1; all three CNPG Clusters
ContinuousArchiving=True at s3://cnpg on the MinIO), and the dev overlay now
restates all five explicitly for the same reason LONGHORN_DATA_PATH is restated —
a silent drift in base would ORPHAN the backups dev's PROVEN restore depends on.
The empty-prefix case was the one real risk, and it is settled empirically: with
prefix "" the chart omits objectStorage.prefix from the rendered
BackupStorageLocation ENTIRELY (helm template, chart 12.1.0), so dev's live BSL is
unchanged, not merely equivalent.

R2's TWO GOTCHAS, both wired up front:
  - region must be exactly `auto`. head-bucket answers {"BucketRegion":"WNAM"},
    which is a PHYSICAL LOCATION HINT, not a signing region. This was hardcoded
    us-east-1 inside the Velero HelmRelease — correct-by-accident for MinIO, wrong
    for anything else — so it is a knob now.
  - checksumAlgorithm: "". velero-plugin-for-aws v1.14.2 bundles an AWS SDK with
    flexible checksums on by default and sends x-amz-sdk-checksum-algorithm /
    x-amz-checksum-crc32 on every PUT; R2 rejects those with HTTP 400
    InvalidArgument, failing every backup and every kopia blob upload. It must be
    PRESENT-but-empty (the plugin branches on the key existing), and the chart does
    emit an empty value — verified by rendering it. Harmless against MinIO, so it
    is unconditional rather than a fourth knob.

WHAT THIS DOES NOT DO. Velero stays SUSPENDED on prod. `spec.suspend: true` is
owned by field manager `flux` (verified: kustomize-controller's managedFields do
not include f:suspend), so server-side apply will not strip it, and nothing here
declares suspension — which would also trip R-ENV-03, since a prod overlay may
patch only cluster-vars and a Flux Kustomization's `decryption`. Unsuspending is
the operator's, after `standup.sh --s3-endpoint <r2> s3check` proves a round trip.

NO DNS KNOB IS TOUCHED. BASE_DOMAIN stays prod.home.keithjackson.dev and every
EXTERNALDNS_* value is untouched. The apex inversion on work/prod-standup-campaign
was deliberately NOT carried: this branch ports that branch's R2 reasoning knob by
knob, and merges nothing.

VERIFIED: ci/l0.sh green (flux-postbuild-substitution 272 assertions, 0 hazards,
33 knobs defined / 28 referenced, every new token resolved in BOTH overlays);
render-golden, lint, schema, spec-immutability green; touched requirement
R-STATE-03 covered.

Refs R-STATE-03, R-IDP-05, R-ENV-02, R-ENV-03.

Co-Authored-By: Claude Opus 5 <[email protected]>
2026-09-07 01:14:29 -05:00
..

clusters/

Flux entrypoints and the environment-overlay model (R-ENV-02, R-GITOPS-01/02/03).

Governing spec: docs/05-gitops-and-delivery.md, docs/02-environments-and-provisioning.md, ADR-0004 (Flux).

Phase 0 scaffolding only. These are structurally-correct stubs. No cluster exists — nothing here reconciles until WS-INFRA delivers a cluster and bootstraps Flux (roadmap Phase 1).

Layout — base + overlay (never fork the base)

clusters/
  base/                 shared Flux objects (one authoring, both environments)
    flux-system.yaml    GitRepository — the reconciliation source (bootstrap → Gitea)
    platform.yaml       Flux Kustomization → ./platform   (reconciles first)
    apps-wave-0.yaml    Flux Kustomization → ./apps/wave-0 (dependsOn platform-config)
    apps-wave-1.yaml    Flux Kustomization → ./apps/wave-1 (dependsOn apps-wave-0)
    apps-wave-2.yaml    Flux Kustomization → ./apps/wave-N (dependsOn apps-wave-N-1)
    cluster-vars.yaml   ConfigMap of overlay knobs (BASE defaults)
    kustomization.yaml
  dev/                  ACTIVE build target — patches cluster-vars with dev values only
    kustomization.yaml
  prod/                 DESIGN-ONLY until roadmap Phase 7 — patches cluster-vars with prod values only
    kustomization.yaml

How the overlay model satisfies R-ENV-02

The base authors the reconciliation graph once. platform.yaml and the app-wave Kustomizations (apps-wave-0/1/2.yaml — the single apps.yaml was retired; apps-vms.yaml deliberately omits it, see below) declare postBuild.substituteFrom the cluster-vars ConfigMap. Platform and app manifests use ${TOKEN} placeholders for every value that legitimately differs between environments (issuer, replica counts, storage sizes, retention, node placement).

clusters/dev and clusters/prod differ ONLY by the values they patch into cluster-vars — they add no resources of their own and never copy/fork a base manifest. Promotion to prod (docs/02) is a change to the prod overlay's variables, nothing else.

LAN addressing is a knob, not a literal (fixed 2026-08-31)

Until 2026-08-31 the base manifests hardcoded the dev LAN: the k3s API host Cilium dials, the Cilium LB IP pool range, the pinned crafty/unifi L4 VIPs and the off-cluster S3 backup endpoint. That broke R-ENV-02 outright — clusters/prod would have rendered dev addresses (192.168.1.x) onto the prod LAN (192.168.2.x). They are now the cluster-vars "LAN addressing" block (K3S_API_HOST, CILIUM_LB_POOL_START/_STOP, UNIFI_L4_VIP, CRAFTY_L4_VIP, S3_BACKUP_ENDPOINT, alongside the pre-existing GATEWAY_VIP), set explicitly by BOTH overlays.

Two rules when touching that block:

  1. Substitution coverage. A ${TOKEN} only resolves in a path whose Flux Kustomization declares postBuild.substituteFrom: cluster-vars; anywhere else the literal string ${TOKEN} ships to the cluster. apps-vms was the one path without it and now has it — which means every shell ${...} in a VM manifest's cloud-init must be escaped $${...} (see clusters/base/apps-vms.yaml for the full envsubst escape contract).
  2. GATEWAY_VIP must be inside CILIUM_LB_POOL_START..STOP, and in practice equal to START: the shared Gateway pins no address, so Cilium LB-IPAM gives it the pool's first free IP while split-horizon CoreDNS answers with ${GATEWAY_VIP}. A VIP outside the pool blackholes in-cluster hairpin traffic while the Gateway still looks healthy.

Values the operator has not decided are TBD-PROD-* placeholders, not guesses: prod inherits the DEV base defaults if an overlay op is simply omitted, so an invalid value that fails loudly is strictly safer than a plausible one that quietly comes up on the wrong network.

How Flux is pointed at an environment

flux bootstrap (run by WS-INFRA in Phase 1) targets one environment's path per cluster:

# dev cluster
flux bootstrap ... --path=clusters/dev
# prod cluster (Phase 7 only — design-only until then)
flux bootstrap ... --path=clusters/prod

Bootstrap materializes the flux-system Kustomization that renders the chosen overlay, which pulls in base/ and applies the env-scoped cluster-vars.

Reconciliation order

GitRepository (flux-system)
        │
        ▼
Kustomization: platform  (./platform, substituteFrom cluster-vars)
        │  healthy
        ▼
Kustomization: apps-wave-0  (./apps/wave-0, dependsOn platform-config, substituteFrom cluster-vars)
        │  healthy
        ▼
Kustomization: apps-wave-1  (./apps/wave-1, dependsOn apps-wave-0)
        │  healthy
        ▼
Kustomization: apps-wave-N  (./apps/wave-N, dependsOn apps-wave-N-1)

Second-order CRDs need a THIRD pass (platform-config-cdi, added 2026-09-05)

The controllers/configs split (platform → platform-config) assumes a CRD is registered by the controller install. CDI breaks that: cdi-operator.yaml registers only cdis.cdi.kubevirt.io, and cdi-operator creates storageprofiles / datavolumes / datasources only after it has reconciled the CDI CR. Since kustomize-controller server-side dry-runs every object in a pass before applying any of them, having the CDI CR and the CDI StorageProfiles in one pass was a deadlock, not a race: unknown kind → pass aborts → CR never applied → CRD never created → platform-config can never converge → every tier below it blocked. Invisible on dev (its CDI CRDs have existed for months); it cost 12h on prod's cold start.

So there is a third tier, platform-config-cdi (./platform-config-cdi, dependsOn: platform-config), and a rule:

A CR belongs in platform-config-cdi, not platform-config, when the CRD it needs is created by a controller at runtime rather than by a manifest in git.

apps-vms dependsOn it as well as platform-config, because CDI reads StorageProfile/longhorn-vm at DataVolume provisioning time — a VM disk provisioned before that profile exists is stamped RWO/Filesystem and is permanently not live-migratable.

Wave 0 dependsOn platform-config (transitively platform) so CNI/storage/TLS/DNS/gateway exist before any workload reconciles. The app tier is split into dependency-ordered WAVES (catalog/render.py --emit-waves): each apps-wave-<N> health-gates (wait:true) ONLY its own wave, so a crashloop in a later wave can no longer stall an earlier wave or block new revisions. See DESIGN-waves.md for the wave table + cutover runbook.

TODOs (later phases — do not action in Phase 0)

  • Source cutover (WS-GITOPS, Phase 6): base/flux-system.yaml currently points at the bootstrap source. After Gitea is onboarded, repoint spec.url to gitea.home.keithjackson.dev and keep an off-cluster mirror (spec docs/05 "Source-of-truth", CONTRIBUTING.md).
  • SOPS decryption (WS-SEC, Phase 1): add spec.decryption.provider: sops (age secret name only, never plaintext) to the platform/apps Kustomizations once the age key is bootstrapped (ADR-0007).
  • Split ordered Flux Kustomizations if intra-platform ordering needs to be explicit (e.g. a separate cilium/longhorn Kustomization others dependsOn).