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home-network-k3s-impl/runbooks/monitoring-capacity.md
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jakman85andClaude Opus 5 b7341b329b fix(runbooks): declare whole-repo scope, drop the bespoke l0 stage, +cnpg-primary-spread
Three corrections after rebasing onto main.

1. THE GUARD CAUGHT A REAL ONE ON ITS FIRST CONTACT WITH main. main had gained
   `CNPGPrimariesCoLocated` (platform/cnpg/alerts.yaml) pointing at
   /runbooks/cnpg-primary-spread, with no runbook. The check failed the rebase exactly as
   designed — 46 annotations, 35 names, 34 present — naming both the missing file AND the
   missing configMapGenerator entry. runbooks/cnpg-primary-spread.md now exists: what
   co-located primaries actually cost here (blast radius, not an outage, because
   instances: 3 + required anti-affinity), why the drift is uncorrectable-by-declaration
   (CNPG has no primary-placement field), the readiness gate that keeps the rule quiet
   during a real node outage, and the ~9s-per-database switchover rebalance, one cluster
   at a time. The 2026-09-07 outage in which all three primaries sat on one node is the
   reason the alert exists at all.

2. WHOLE-REPO SCOPE, NOT A HAND-WRITTEN STAGE. main's refactor replaced ci/l0.sh's
   per-check "UNCONDITIONAL" stages with a declaration:
   `conformance.home.k3s/scope: "whole-repo"`, unioned into every gate run by Stage 3b's
   `--include-scope`. My +38-line Stage 3f is removed (ci/l0.sh is now byte-identical to
   main) and the annotation is declared instead. Assertion (7) of the check was rewritten
   to match: it no longer asserts its own path appears in ci/l0.sh — it asserts the test
   DECLARES the scope and that ci/l0.sh still passes --include-scope, since neither half
   alone makes the check load-bearing. That matters here because
   ci/touched-requirements.sh maps platform/monitoring/* to "R-OBS-01 R-OBS-02", not
   R-OBS-04, and maps platform/kubevirt/* and runbooks/* to nothing at all.

3. A FACTUAL CORRECTION IN ALL 35 RUNBOOKS. Every page claimed `dev.sh` defaults its
   current-context to k3s-dev. main's `9b4744d fix(devcontainer): dev.sh defaults to
   prod` made that false, and a runbook that misstates which cluster a command talks to is
   worse than one that says nothing. The pages now say what is durably true: the default
   has already changed once, so naming `--context k3s-prod` is what makes a command mean
   the same thing next month, and the per-invocation banner is there to be read. The
   check's own failure message was corrected the same way.

Re-verified after all three: check green at 374 assertions (46 annotations, 35/35 runbooks
present, 35/35 projected), re-applied to prod, and re-probed in-cluster through the
Gateway — node-down, keycloak-down, keycloak-client-secrets, cnpg-archiving,
longhorn-faulted, vpn-down, node-io and cnpg-primary-spread all HTTP 200 with
text/plain; charset=utf-8 and 8.9-12.1 KB of real body; /runbooks/ index 200; an unknown
name 404s with a pointer rather than a blank page; and homepage still answers the apex `/`,
confirming Gateway API longest-path precedence.

Full merge gate: PASS (spec-immutability, lint, l0, render-golden, l1 all green;
prom-rules SKIPPED for want of promtool in the image; L2/L3 SKIPPED, no cluster).

Co-Authored-By: Claude Opus 5 <[email protected]>
2026-09-13 00:00:24 -05:00

134 lines
7.6 KiB
Markdown

# monitoring-capacity — The monitoring stack's own PVC is filling up
**Alert:** `MonitoringVolumeFillingUp` (warning, 15m)
**File:** `platform/monitoring/alerts.yaml`, group `platform-health.monitoring-self`
**Expression:** `kubelet_volume_stats_available_bytes{namespace="monitoring"} / kubelet_volume_stats_capacity_bytes{namespace="monitoring"} < 0.15`
## What this means here
"Don't let the monitor blind itself." Prometheus or Loki is running out of disk. If it fills, you lose
the ability to see every other alert in this set — which is why `monitoring` gets its own rule instead
of sharing `/runbooks/pvc-capacity` (the two files partition the namespace space between them; the
thresholds are deliberately identical, 15% free for 15m).
Live shape on prod:
- `prometheus-...-prometheus-0` PVC **50Gi**, `retention: 30d`, `retentionSize: 45GiB`
- `storage-loki-0` PVC **50Gi**
- both on the `longhorn` class, 3 replicas
`retentionSize: 45GiB` against a 50Gi PVC is intentional: Prometheus is *supposed* to plateau near the
high-water mark and then stay there. **So a Prometheus TSDB approaching 45 GiB is normal, not a leak.**
That is also why the predictive rule in `pvc-capacity-alerts.yaml` deliberately **excludes** the
`monitoring` namespace: a TSDB filling toward its retention limit looks exactly like an unbounded leak
to `predict_linear` until it plateaus.
So the real question is *which* PVC and *whether it should be plateauing*: read the
`persistentvolumeclaim` label first. Loki has no size cap analogous to `retentionSize`, so a log
volume growing past 85% is the more likely genuine problem of the two.
## Running the commands in this runbook
`kubectl` does not work on the operator workstation. The toolchain lives only in the pinned dev
container, and the host's `k3s-oidc` context hangs on a browser prompt once its token expires —
that hang is not the cluster being down. Every command below runs as:
infra/devcontainer/dev.sh run bash -c 'kubectl --context k3s-prod get nodes'
Always pass `--context k3s-prod` explicitly. `dev.sh` merges BOTH clusters into one kubeconfig and
picks a current-context per invocation, and **that default has already changed once** — it was k3s-dev
until dev was decommissioned on 2026-09-13, and is k3s-prod now. A command that names its context means
the same thing next month as it does today; one that relies on the default does not, and the failure is
silent (it answers confidently about the other cluster). `CLUSTER=prod infra/devcontainer/dev.sh run
kubectl ...` selects it explicitly, and every invocation prints a banner naming the cluster it is about
to talk to — read it. Do not run two `dev.sh` invocations at once; they share one container and
interfere.
USE FULLY-QUALIFIED RESOURCE NAMES, ALWAYS. Three CRDs on this cluster register the kind `Backup`:
`longhorn.io/v1beta2`, `postgresql.cnpg.io/v1` and `velero.io/v1`. The bare short name resolves to
Longhorn's, which holds zero objects — so `kubectl get backup -A` prints **"No resources found"** on
a cluster holding 6 Velero backups and 27 CNPG backups. Verified on prod 2026-09-13. Reading that as
"the backups are gone" and acting on it turns a false negative into real data loss. Write
`backups.velero.io`, `backups.postgresql.cnpg.io`, `clusters.postgresql.cnpg.io`,
`settings.longhorn.io`, `volumes.longhorn.io`, `nodes.longhorn.io`.
Mutating kubectl (`apply`, `patch`, `annotate`, `rollout`) and `flux reconcile` are blocked for
agents here: every durable change goes through git (`git push origin main` **is** the deploy).
Where this runbook gives a mutating command it is for an operator, and it says so.
## First commands
```
infra/devcontainer/dev.sh run bash -c \
'kubectl --context k3s-prod -n monitoring get pvc; echo; \
kubectl --context k3s-prod -n monitoring get prometheus -o jsonpath="{.items[0].spec.retention} {.items[0].spec.retentionSize}{\"\n\"}"'
```
Actual on-disk usage from inside the pods:
```
infra/devcontainer/dev.sh run bash -c \
'kubectl --context k3s-prod -n monitoring exec prometheus-kube-prometheus-stack-prometheus-0 -c prometheus -- df -h /prometheus; \
kubectl --context k3s-prod -n monitoring exec loki-0 -- df -h /var/loki'
```
Is Prometheus at its retentionSize (normal) or past it (a problem)?
```
infra/devcontainer/dev.sh run bash -c \
'kubectl --context k3s-prod -n monitoring port-forward svc/kube-prometheus-stack-prometheus 19090:9090 & sleep 5; \
for q in "prometheus_tsdb_storage_blocks_bytes" "prometheus_tsdb_head_series" "rate(prometheus_tsdb_compactions_failed_total[1h])"; do \
printf "%s " "$q"; curl -s -G --data-urlencode "query=$q" localhost:19090/api/v1/query | python3 -c "import json,sys;print([x[\"value\"][1] for x in json.load(sys.stdin)[\"data\"][\"result\"]])"; done'
```
Series growth is the usual driver — find the biggest contributors:
```
infra/devcontainer/dev.sh run bash -c \
'kubectl --context k3s-prod -n monitoring port-forward svc/kube-prometheus-stack-prometheus 19090:9090 & sleep 5; \
curl -s "localhost:19090/api/v1/status/tsdb" | python3 -m json.tool | head -40'
```
## Likely causes, most likely first
### 1. Prometheus has reached its retention high-water mark (expected)
`retentionSize: 45GiB` on a 50Gi PVC leaves 10% headroom, which is close to the 15% trigger. If
`prometheus_tsdb_storage_blocks_bytes` is near 45 GiB and steady, **this is the design working** and
the correct response is either to accept it or to raise both the PVC and `retentionSize` together in
`platform/monitoring/kube-prometheus-stack.yaml`. Raising retention without raising the PVC is how you
get a genuinely full disk.
### 2. Loki log volume growth
Loki has no retentionSize equivalent configured. A noisy workload (a crashlooping pod, a chatty
reconciler) can grow it quickly. Remediation: find the noisy stream in Grafana → Explore, fix the
source, and set/lower Loki retention in git.
### 3. Series cardinality grew after a chart or workload change
`serviceMonitorSelectorNilUsesHelmValues` and `podMonitorSelectorNilUsesHelmValues` are both `false`
here, which means **Prometheus selects every ServiceMonitor/PodMonitor in the cluster regardless of
labels**. That is convenient (no `additionalLabels` needed anywhere) and it also means a new
component's monitor is picked up automatically, cardinality and all. Check
`/api/v1/status/tsdb` for the top label pairs.
### 4. Compaction is failing
`rate(prometheus_tsdb_compactions_failed_total[1h]) > 0` means blocks are not being merged or expired.
Usually an I/O problem underneath — cross-read `/runbooks/node-io`.
### 5. The volume is on a node that is itself short of space
`/runbooks/longhorn-capacity` and `/runbooks/node-disk`.
## When to escalate or stop
- **Do not delete Prometheus TSDB blocks or Loki chunks by hand.** Lower retention and let the
component expire them; hand-deleting blocks can leave the TSDB unopenable.
- **Do not raise `retention` or `retentionSize` without raising the PVC in the same change.**
- If Prometheus is already full and crashlooping, you are blind: check the alerts you care about
directly against the CRs (`clusters.postgresql.cnpg.io`, `volumes.longhorn.io`, `kubectl get nodes`)
rather than waiting for alerts that cannot be evaluated.
- Escalate for PVC expansion — it needs node headroom, and this cluster has been memory- and
disk-constrained before (Prometheus was already raised 2 → 3Gi of RAM after the kps 65→88 upgrade).
---
Source of truth: `runbooks/monitoring-capacity.md`. Index: `/runbooks/`
Records: `platform/monitoring/pvc-capacity-alerts.yaml` (why monitoring is excluded from the
predictive rule); `DECISIONS-LOG.md` (Grafana OOM / Prometheus 2→3Gi during kps 65→88).